Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVRGFELVSQFSNKELLPKRETAHAAGYDLKVAKKTVIEPGEITLVPTGIKAHMQPGEVLYLYDRSSNPRKKGIVLINSVGVIDGDYYNNQVNEGHIFAQMQNITDQAVILEEGERIVQAVFAPFLL-----ADDDQATGMRTGGFGSTGK
1F7D Chain:A ((3-118))
------------IEGDGILDKRS--EDAGYDLLAAKEIHLLPGEVKVIPTGVKLMLPKGYWGLIIGKSSIGS-KGLDVL--GGVIDEGY------RGEIGVIMINVSRKSITLMERQKIAQLIILPCKHEVLEQGKVVM--------------
General information:
TITO was launched using:
RESULT:
Template:
1F7D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57580 for 759 contacts (-75.9/contact) +
2D Compatibility (PS) -11777 + (NN) -1986 + (LL) 1292
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -79851.0 ( -105.21 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_1F7D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F7D-query.scw
PDB file :
Tito_Scwrl_1F7D.pdb
: