Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVFEKVQEIIVEELGKDAEEVTLNTTF-DDLDADSLDVFQVISEIEDAFDIQIETE--EGLNTVGDLVAYVEEKVK
3GZM Chain:A ((7-78))
---FDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNN-
General information:
TITO was launched using:
RESULT:
Template:
3GZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34809 for 442 contacts (-78.8/contact) +
2D Compatibility (PS) -7285 + (NN) -1574 + (LL) 736
1D Compatibility (HY) -8400 + (ID) 1150
Total energy: -52482.0 ( -118.74 by residue)
QMean score : 0.697
(partial model without unconserved sides chains):
PDB file :
Tito_3GZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GZM-query.scw
PDB file :
Tito_Scwrl_3GZM.pdb
: