Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKPFIAGNWKMNKNPEEAKAFIEAVAS-KLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQV--SSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK
4BI6 Chain:A ((3-252))
-ARRPFIGGNFKCNGSLDFIKSHVAAIAAHKIPDS--VDVVIAPSAVHLSTAIAANTSKQLRIAAQNVYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSANGSNNEKLGQCPNIDGFLVGGASLKPE-FMTMIDILT
General information:
TITO was launched using:
RESULT:
Template:
4BI6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104606 for 2096 contacts (-49.9/contact) +
2D Compatibility (PS) -26864 + (NN) -13036 + (LL) 460
1D Compatibility (HY) -20400 + (ID) 5150
Total energy: -169596.0 ( -80.91 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_4BI6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BI6-query.scw
PDB file :
Tito_Scwrl_4BI6.pdb
: