Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELPEVETVRKGLERLVVNQEIASITIKVPKMV-KT-DLNDFMISLPGKTIQQVLRRGKYLLFDFGE-MVMVSHLRMEGKYLLFPNKVPDNKHFHLYFKLTNGSTLVYQDVRKFGTFELVRKSSLKDYFTQKKLGPEPTADTFQFEPFSKGLANSKKPIKPLLLDQRLVAGLGNIYVDEVLWAAKIHPQRLANQLTESETSLLHKEIIRILTLGIEKGGSTIRTYKNALGEDGTMQKYLQVYGKTGQPCP--RCGCLIKKIKVGGRGTHYCPRCQCL |
| 3TWL Chain:A ((2-278)) | -PELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGISPSDFQTSILGKTIISARRKGKNLWLELDSPPFPSFQFGMAGAIYIK----WPSKYSKFFVELDDGLELSFTDKRRFAKVRLLANPT--SVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGYISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADSS-----------QFPSNWIFHNREKKPGKAFVDGKKIDFITA------YVPELQKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TWL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97950 for 2001 contacts (-49.0/contact) +
2D Compatibility (PS) -26112 + (NN) -8751 + (LL) 396
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -149667.0 ( -74.80 by residue)
QMean score : 0.398
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