Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENF--LTHAKEGY-YNGLSFHRVIKDFMIQSGD-PNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYLYNIRGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK |
4ZSD Chain:A ((17-158)) | ------------------------------------------------------------------------------------GRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDE---NFTLKHVGP------GVLSMANAGPNTNGSQFFICTIKTDW------------------------LDGKHVVFGHVIEGMDVVKKIESFG-SKSGRTSKKIVITDCGQLS----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZSD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -19171 for 1018 contacts (-18.8/contact) +
2D Compatibility (PS) -14773 + (NN) -7712 + (LL) 8668
1D Compatibility (HY) -11200 + (ID) 3350
Total energy: -47538.0 ( -46.70 by residue)
QMean score : 0.500
|
|
|