Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAISWKEMNELQPRVMKLLYNSIEKDRLSHAYLFEGKKGTGKLDAALLLAKSFFCLEGGAEPCESCRNCKRIESGNHPDLHLVQPDGLSIKKAQI-QALQEEFSKTGLES-HKKLYIISHADQMTANAANSLLKFLEEPNKDTMAVLITEQPQRLLDTIISRCQTLPFQPLQPKAIEDRLIE----QD--VSPHMARL---LANMTNNVAEAVELSRN-DEFAE--SRAKV------------IKLYEVLHQRKGH--AFFFIQDQWMPFFKEKTHQEMGLDMLLLIYRDVLSIQIGNEDKLIYQDLFQSIKQHALQSTQQSVTNQILAVLEAKKRLHSNVNVQGLMEHLVLMLQEG |
| 2CHQ Chain:A ((13-315)) | -PRTLDEVV-GQDEVIQRLKGYVERKNIP-HLLFSGPPGTGKTATAIALARDLFGENWR------------------DNFIEMNAS-DERGIDVVRHKIKEFARTAPIGGAPFKIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYIS--GGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTAL--KGNFMEARELLDRLMV--EYGMSGEDIVAQLFREIISMP-I------------------------KDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLST- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CHQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113450 for 1956 contacts (-58.0/contact) +
2D Compatibility (PS) -30400 + (NN) -23028 + (LL) 3128
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -176450.0 ( -90.21 by residue)
QMean score : 0.505
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