Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------------------------------------------------------------------------MKWMCSICCAAVLLAGGAAQAEAVPNEPINWGFKRSVNHQPPDAG-----------------KQLNSLIEKYDAFYLGNTKEKTIYLTFDNGYENGYTPKVLDVLKKHRVTGTFFVTGHFVKDQPQLIKRMSDEGHIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKITGKQDNLYLRPPRGVFSEYVLKETKRLGYQTVFWSVAFVDWKINNQKGKKYAYDHMIKQAHPGAIYLLHTVSRDNAEALDDAITDLKKQGYTFKSIDDLMFEKEMRLPSL-----
2C1I Chain:A ((14-431))FEQKIESLKKEKDDQLSEGNQKEHFRQGQAEVIAYYPLQGEKVISSVRELINQDVKDKLESKDNLVFYYTEQEESGLKGVVNRNVTKQIYDIEETEKTSLGKVHLTEDGQPFTLDQLFSDASKAKEQLIKELTSFDLSAWNFDYKDSQIILYEIALPVSAFFDVIQSSYLLEKDAALYQSYFDKKHQKVVALTFNDGPNPATTPQVLETLAKYDIKATFFVLGKNVSGNEDLVKRIKSEGHVVGNHSWSHPILSQLSLDEAKKQITDTEDVLTKVLGSSSKLM-RPPYGAITDDIRN---SLDLSFIMWDVDSLDWKSKN---EASILTEIQHQVANGSIVLMHDIHSPTVNALPRVIEYLKNQGYTFVTIPEMLNTRLKAHELYYSRDE


General information:
TITO was launched using:
RESULT:

Template: 2C1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1134 -109908 -96.92 -429.33
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -96.92
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_2C1I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2C1I-query.scw
PDB file : Tito_Scwrl_2C1I.pdb: