Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRTWNVCLTALLSVLLVAGSVPFHAEAKKPPKSYDEYKQVDVGKDGMVATAHPLASEIGADVLKKGGNAIDAAVAIQFALNVTEPMMSGIGGGGFMMVYDGKTKDTTIIDSRERAPAGATPDMFLDENGKAIPFSERVTKGTAVGVPGTLKGLEEALDKWGTRSMKQLITPSIKLAEKGFPIDSVLAEAISDYQEKLSRTAAKDVFLPNGEPLKEGDTLIQKDLAKTFKLIRSKGTDAFYKGKFAKTLSDTVQDFGGSMTEKDLENYDITIDEPIWGDYQGYQIATTPPPSSGGIFLLQMLKILDHFNLSQYDVRSWEKYQLLAETMHLSYADRASYAGDPEFVNVPLKGLLHPDYIKERQQLINLDQVNKKPKAGDPWKYQEGSANYKQVEQPKDKVEGQTTHFTVADRWGNVVSYTTTIEQL-FGTGIMVPDYGVILNNELTDFDAIPGGANEVQPNKRPLSSMTPTILFKDDKPVLTVGSPGGATIISSVLQTILYHIEYGMELKAAVEEPRIYTNSMSSYRYEDGVPKDVLSKLNGMGHKFGTS--PVDIGNVQSISIDHENGTFKGVADSSRNGAAIGINLKRK
3G9K Chain:S ((1-176))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTHFVIIDRDGTVVSSTNTLS-NFFGTGKYT--AGFFLNNQLQN------------PGKRSRTFMAPTVLKKDGE-TIGIGSPGGNRIPQILTPILDKYTHGKGSLQDIINEYRFTFEKN-TAYTEIQLSSEVKNELSRKGLNVKKKVSPAFFGGVQALIKDERDNVITGAGDGRRNGTWKSN-----


General information:
TITO was launched using:
RESULT:

Template: 3G9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain S - contact count / total energy / energy per contact / energy per residue : 710 11882 16.73 72.89
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain S : 0.58

3D Compatibility (PKB) : 16.73
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_3G9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3G9K-query.scw
PDB file : Tito_Scwrl_3G9K.pdb: