Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKAVTYQG-IKNVVVKDVPDPKIEKSDDMIIKVTSTAICGSDLHLIHGFIPNMQEDYVIGHEPMGIVEEVGSGVTKLKKGDRVIIPFNIACGECFFCKNQLESQCDQSND-NGEMGAYFGYSG--------QTGGYPGGQAEYLRVPFANFTHFKIPESCEEPDEKLSVIADAMTTGFWSVDNA-GVKKGDTVIVLGCGPVGLFAQKFCWLKGAKRVIAVDYVNYRLQHAKRTNKVEI-VNFEDHE--NTGNYLKEITKGGADVVIDAVGMDGKMSDLEFLASGLKLHGGTMSALVIASQAVR-KGGTIQITGVYGGRYN-GFPLGDIMQRNVNIRSG-QAPV--IHYMPYMFELVSTGKIDPGDVVSHVLPLSEAKHGYDIFDSKMDDCIKVVLKP
2FZW Chain:A ((7-372))CKAAVAWEAGKPLSIEEIEVA-PPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVA--DISVAKIDPL--APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF-GATECINPQDFSKPIQEVLI-EMTDGGVDYSFECIGNV--------------------KVMRAALEACHKGWGVSVVVGVAASGEEIATRP-FQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGK--SIRTVVK-


General information:
TITO was launched using:
RESULT:

Template: 2FZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2150 -41452 -19.28 -119.46
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -19.28
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_2FZW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FZW-query.scw
PDB file : Tito_Scwrl_2FZW.pdb: