Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARASGASDYRSGELSHQDERGAAHMVDITEKATTKRTAVAAGILRTSAQVVALISTGGLPKGDALATARVAGIMAAKRTSDLIPLCHQLALTGVDVDFTVGQL----DIEITATVRSTDRTGVEMEALTAVSVAALTLYDMIKAVDPGALIDDIRVLHKEGGRRGTWTRR
2EEY Chain:A ((2-160))
------------SSFTHFNEQGRAKMVDITHKEDTVRVAVAQTSVTVSREIYEKMTSNAIEKGDVLAVAQVAGVMAAKKTADLIPMCHPLMLKGVDIAFAWENDGEAHKLVITATVKTKGSTGVEMEALTAASVCALTVYDMCKALDKGMVIGPTYLVEKTGGKSGHYRRK
General information:
TITO was launched using:
RESULT:
Template:
2EEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78703 for 1134 contacts (-69.4/contact) +
2D Compatibility (PS) -16792 + (NN) -8188 + (LL) 600
1D Compatibility (HY) -14800 + (ID) 3750
Total energy: -121633.0 ( -107.26 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_2EEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EEY-query.scw
PDB file :
Tito_Scwrl_2EEY.pdb
: