Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSA-KAFAAGADIKEMA---DLTFADAFTADFFATWGKLAAVR----TPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSL-SEGLLYER--RLFHSAFATEDQSEGMAAFIEKRAPQFTHR |
| 3R0O Chain:B ((13-273)) | -TRQAAVVERRGNVALITIDRPDARNAVNGAVSTAVGDALEEAQRDPEVWAVVITGAGDKSFCAGADLKAISRGENLYHAE------HPEWGFAGYVHHFIDKPTIAAVNGTALGGGSELALASDLVIACESASFGLPEVKRGLIAGAGGVFRIVEQLPRKVALELVLTGEPMTASDALRWGLINEVVPDGTVVEAALALAERITCNAPLSVQASKRVAYGADDGIIGAEEPKWERTIREFTELLKSEDAKEGPLAFAEKRQPVWKAR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116170 for 2054 contacts (-56.6/contact) +
2D Compatibility (PS) -27247 + (NN) -6548 + (LL) 736
1D Compatibility (HY) -11200 + (ID) 5000
Total energy: -165429.0 ( -80.54 by residue)
QMean score : 0.356
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