Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPLAPVGVFD-SGVGGLTVARAIIDQLPDEDIVYVGDTGNGPYGPLTI-PEIRAHALAIGDDLVGRGVKALVIACNSASSACLRDARERYQVPVVEVILPAVRRAVAATRNGRIGVIGTRATITSHAYQDAFAAAR-DTEITAVACPRFVDFVERGVTSGRQVLGLAQGYLEPLQRAEVDTLVLGCTHYPLLSGLIQLAMGENVTLVSSAEETAKEVVRVLTEIDLLRPHDAPPATRIFEATGDPEAFTKLAARFLGPVLGGVQPVHPSRIH
1B74 Chain:A ((1-252))
-----MKIGIFDSG-VGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRS-KDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSGAYQRKLEEGGADVFAKA--CPLFAPLAEEGLLEGEITRKVVEHYLKEFKG-KIDTLILGCTHYPLLKKEIKKFLG-DAEVVDSSEALSLSLHNFIK--------DDGSSSLELFFTDLSPNLQFLIKLILGRDYP-VKLAEGVF--
General information:
TITO was launched using:
RESULT:
Template:
1B74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -199164 for 2112 contacts (-94.3/contact) +
2D Compatibility (PS) -27324 + (NN) -11867 + (LL) 1416
1D Compatibility (HY) -20000 + (ID) 4400
Total energy: -261339.0 ( -123.74 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_1B74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B74-query.scw
PDB file :
Tito_Scwrl_1B74.pdb
: