Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIALLAPGQGSQTEGMLSPWLQ-LPGAADQIAAWSKAADLDLARLGTTASTEEITDTAVAQPLIVAATLLAHQELARRCVLAGKD----VIVAGHSVGEIAAYAIAGVIAADDAVALAATRGAEMAKACATEPTGMSAVLGGDETEVLSRLE----QLDLVPANRNAAGQIVAAGRLTALEKLAEDPP-AKA-RVRALGVAGAFHTEFMAPALDGFAAAAANIATADPTATLLSNRDGKPVTSAAAAMDTLVSQLTQPVRWDLCTATLREHTVTAIVEFPPAGTLSGIAKRELRGVPARAVKSPADLDELANL |
3QAT Chain:A ((7-312)) | -AAFTFPGQGSQLIGMGKVLTEQFVAARMVFEEVDDALSEKLSDIIFEGPADVLTLTANAQPALMAVSMAVIRVMEQLGL---NVEKKVKFVAGHSLGEYSALCAAGTFSLTDTARLLRIRGNAMQAAVAVGEGSMAALIGLDEKDVEEICEIVAEEGLCQIANDNGGGQIVISGEAKAVETAVEVASQKGAKRAVLLPVSAPFHSALMQPAANAMKNALLTVNKTAPIVPLIANVSVIPESDPERIVSLLVQQVTGRVRWRETIEWISANGVNTLFEIGSGKVLTGLARRINKDIKALTVGTAEEIEAA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QAT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169081 for 2715 contacts (-62.3/contact) +
2D Compatibility (PS) -31760 + (NN) -13017 + (LL) 596
1D Compatibility (HY) -12800 + (ID) 4150
Total energy: -230212.0 ( -84.79 by residue)
QMean score : 0.541
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