Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRGKYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAV--PCAAHVRISALLDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENCRR-CGAVIRRERFMNRSSFYCPRCQPRPRK |
| 4PD2 Chain:A ((1-272)) | -PELPEVETVRRELEKRIVGQKIISIEATYPRMVL---TGFEQLKKELTGKTIQGISRRGKYLIFEIGD-------DFRLISHLRMEGKYRLATLDAPREKHDHLTMKFAD-GQLIYADVRKFGTWELISTDQV---LPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIR-TYS-ALGSTGKMQNELQVYGKTGEKCSRGHGAEIQKIKVAGRGTHFCPVCQQK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130804 for 2192 contacts (-59.7/contact) +
2D Compatibility (PS) -28505 + (NN) -9633 + (LL) -36
1D Compatibility (HY) -14800 + (ID) 4550
Total energy: -188328.0 ( -85.92 by residue)
QMean score : 0.431
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