Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKARELDVPGAWEITPTIHVDSRGLFFEWLTDHGFRAFAGHSLDVRQVNCSVSSAGVLRGLHFAQLPPSQAKYVTCVSGSVFDVVVDIREGSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAEYNPQREHTICATDPTLAVDWPLVDGAAPSLSDRDAAAPSFEDVRASGLLPRWEQTQRFIGEMRGT
1DZR Chain:A ((2-181))
MIVIKTAIPDVLILEPKVFGDERGFFFESYNQQTFEELIGRKVTFVQDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSEYAEFLYKATNYYSPSSEGSILWNDEAIGIEWPFSQ--LPELSAKDAAAPLLDQALL--------------------
General information:
TITO was launched using:
RESULT:
Template:
1DZR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103821 for 1401 contacts (-74.1/contact) +
2D Compatibility (PS) -18966 + (NN) -6943 + (LL) 1192
1D Compatibility (HY) -13600 + (ID) 3350
Total energy: -145488.0 ( -103.85 by residue)
QMean score : 0.725
(partial model without unconserved sides chains):
PDB file :
Tito_1DZR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DZR-query.scw
PDB file :
Tito_Scwrl_1DZR.pdb
: