Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDRYCVFGNPIGHSKSPLIHRLFAEQTGEALVYDAQLAPLDDFPGFARRFF-EQGKGANVTVPFKEEAYRLVDELSERATRAGAVNTLIRLADGRLRGDNTDGAGLLRDLTANAGVELRGKRVLLLGAGGAVRGVLEPFLGECPAELLIANRTARKAVDLAERFADLGAVHGCGF-AEVEGPFDLIVNGTSASLAGDVPPLAQSVIEPGRTVCYDMMYAK-EPTAFNRWAAERGAAR-TLDGLGMLVEQAAEAFFLWRGVRPASAPVLETLRRQLATV |
1P77 Chain:A ((1-271)) | MDLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAKLAEACNTLKKLDDGKLYADNTDGIGLVTDL-QRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSA-------SVDAEILKL-GSAFYDMQYAKGTDTPFIALCKSLGL-TNVSDGFGMLVAQAAHSFHLWRGVMPDFVSVYEQLKKAML-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149732 for 2310 contacts (-64.8/contact) +
2D Compatibility (PS) -27893 + (NN) -9191 + (LL) 460
1D Compatibility (HY) -21600 + (ID) 5900
Total energy: -213856.0 ( -92.58 by residue)
QMean score : 0.543
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