Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSPYTLGHLTLPNRIVMPPMTRSRAASGEVATALMAEYYSQRAGAG-LIVSEGTQISRQGQGYAWTPGIHSAEQVAGWRQVTDAVHAAGGRIFAQLWHVGRVSHTSLQPGNAAPVSSSALVAEGVKVFVDPQGRGAQAGGGEMVQHSAPRALAVEEIREIVADYAQAARNALDAGFDGVELHGANGYLINQFIDSQANARNDQYGGSLENRLRFLREVAEAVTAVVGRERIGVRLAPLTTLQGAVDDTPQATYLAAARLLDEI------GVAYIHIAEADWEDAPAMPAAFKEA-----LRIVYRGSLIYSGMYTKARAEEALARGWADLVGFGRPFIANPDLPYRLEHDLALADGDRSTYFGGG-AAGYTDYPSLPQAAG |
| 2HS6 Chain:A ((18-390)) | -LFSPYKMGKFNLSHRVVLAPMTRCRALN-NIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGI--------YPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPR---------EEEEARLMRTLRNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKTFYTQDPVVGYTDYPFLQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166235 for 3138 contacts (-53.0/contact) +
2D Compatibility (PS) -37692 + (NN) -19080 + (LL) 1100
1D Compatibility (HY) -27200 + (ID) 7800
Total energy: -256907.0 ( -81.87 by residue)
QMean score : 0.474
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