Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKEIINVVHGTFTQLRSLVMIFGHAFRKRDTLQYPEEPVYLPPRYRGRIVLTRDPDGEERCVACNLCAVACPV---GCISLQKAETEDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQLTPDFEMGEFKRQDLVYEKHDLLISGPGKNPDYNYYRVAGMAIAGKPKGAAQNEAEPINVKSLLP
4CRM Chain:P ((25-72))
-------------------------------------------------------------------CKRSCPVVKTGKLCIEVTPTSKIAFISEIL------CIGCGICVKKCPFDAIQI----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4CRM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35998 for 246 contacts (-146.3/contact) +
2D Compatibility (PS) -4299 + (NN) 152 + (LL) 8192
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -38403.0 ( -156.11 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_4CRM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CRM-query.scw
PDB file :
Tito_Scwrl_4CRM.pdb
: