Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNKVKERAVGTEV-SKSLTPGQAFVKIVRAELEELMGAANEDLALSVAPPAVILMAGLQGAGKTTTAGKLARFLKERKKKSVMVVSADVYRPAAIKQLETLAGEVGVTFFPSDVSQKPVAIAEAAIREARLKFIDVVIVDTAGRLHIDADMMDEIKQVHAAIKPAETLFVVDAMTGQDAANTAKAFNDALPLTGVVLTKVDGDARGGAALSVRAITGKPIKFLGMGEKSEALDPFHPDRVASRILGMGDVLSLIEQAEQNLDRDKAEKLAKKIKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPMLGGVNLAQMGNAQGAAEKQFKQMEAIINSMTPGERRDPEMISGSRKRRIALGSGTQVQDVGRLIKQHKQMQKMMKKVTAKGGMAKMMRGMGSMFPGGMPKL |
2FFH Chain:A ((1-418)) | MFQQLSARLQEAIGRLRGRGRITEEDLKATLREIRRALMDADVNLEVTRDFVERVREEAL-GKQVLESLTPAEVILATVYEALKEALGGEA-RL-PVLKDRNLWFLVGLQGSGKTTTAAKLALYYKG-KGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDVASLAEKVRAA-----------------ELSLEDFLKQMQNLKRLGPFSEILGLLPG-VPQGL-------KVDEKAIKRLEAIVLSMTPEERKDPRILNGSRRKRIAKGSGTSVQEVNRFIKAFEEMKALMKSLEK---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -160040 for 3296 contacts (-48.6/contact) +
2D Compatibility (PS) -44895 + (NN) -23322 + (LL) 2660
1D Compatibility (HY) -34800 + (ID) 9200
Total energy: -269597.0 ( -81.80 by residue)
QMean score : 0.439
|
|
|