Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEPQEGKTRFHDFNLAPSLMHAIHDLGFPYCTPIQAQVLGFTLRGQDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAAALTKYTGLNVMTFVGGMDFDKQLKQLEARFCDILVATPGRLLDF--NQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSATFTDDVMNLAKQWTVDPAIVEIEPENVASDTVEQHVYAVAGSDKYKLLYNLVAQNNWERVMVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVHRIGRTGRAGASGTSISFAGEDDAFALPPIEELLGRKITCEMPPAELLKPVPRKH |
| 3BER Chain:A ((36-242)) | IVEEEETKT-FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNALLETP---QRLF----ALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL-AKKPHIIIATPGRLIDHLENTKG-FNLRALKYLVMDEADRILNMDFETEVDKILKVIPR--DRKTFLFSATMTKKVQKLQRAALKNP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180023 for 1681 contacts (-107.1/contact) +
2D Compatibility (PS) -21933 + (NN) -12195 + (LL) 11560
1D Compatibility (HY) -16800 + (ID) 4300
Total energy: -223691.0 ( -133.07 by residue)
QMean score : 0.662
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