Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIAAYQARCQARVDAALDALFVAPREELQRLYEAMRYSVMNGGKRVRPLLAYAACEALGGAPQRADAAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHRAFDEATAILAADGLQALAFEVLADTRRNP---QEHAVCL------EMLTRLARAAGSAGMVGGQAIDLGSVGVALDQAALEVMHRHKTGALIEASVRLGALASGRAEPASLAALERYAEAIGLAFQVQDDILDVESDTATLGKTQGKDQAHNKPTYPALLGLEAAKGYALELRDLALAALDGFPPSADPLRQLARYIVERRN |
| 4GP1 Chain:A ((35-249)) | --------------------------------EAVLYQVKTGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPKPTLFAKEVAEVIKAIDEGERLDILFEAAGRSDPYFVQA---RWREVTLDDYI--KMVSLKTGALIAAAAKWGVLSVSDDRGLAEAAWN-FGMAAGVAFQIIDDVLDIYG-------EIGKDIKEHK------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34763 for 1483 contacts (-23.4/contact) +
2D Compatibility (PS) -22198 + (NN) -20088 + (LL) 7984
1D Compatibility (HY) -11200 + (ID) 4150
Total energy: -84415.0 ( -56.92 by residue)
QMean score : 0.316
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