Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVFQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFEALP-----RLDVLVNNAGI--SRDREEYDLATFERVLRLNLSAAMLASQLARPLL-AQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEAT---RRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGYLCA
2AE2 Chain:A ((9-255))
---------GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLM--
General information:
TITO was launched using:
RESULT:
Template:
2AE2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132380 for 1929 contacts (-68.6/contact) +
2D Compatibility (PS) -25185 + (NN) -13325 + (LL) 1260
1D Compatibility (HY) -22000 + (ID) 4250
Total energy: -195880.0 ( -101.54 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2AE2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AE2-query.scw
PDB file :
Tito_Scwrl_2AE2.pdb
: