Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MSQANELLIGAGPDGQ-----PVGQAWRLANRHGLIAGATGTGKTVTLQHLAESFSDAGVAVFAADIKGDLCGIAAPG-----NPQGKVAERIASMPWLNYQPKAYPTTLWDIAGKTGHPLRTTISEMGPLLLANLLELTDSQQAALFAAFQVADREGLLLLDLKDLKALLNHLKDNPEILGEDRALFTGASGQALLRRLATLEQQGAEAFFGEPALQLEDILRPEPDGRGRIHLLDASRLVHEAPKVYATFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLFNGTPKALRDRLEQVVRLIRSKGVGVYFVTQSPGDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPAFDTLGVLTELGIGEALVGTLEEKGTPAMVQRVAVAPPYSRIGPLSDSERAELVQRSPLKGRYDQPIDRESAYEVLANKAGAKPEVQGQATAQQESSSGVGGMAGQILGSLLSNSTVKSAMRQAANQLSRELVRGLLGSLMGGKKRR |
| 1E9R Chain:A ((4-436)) | VGQGEFGGAPFKRFLRGTRIVSGGKLKRMTREKAKQVTVAGVPMPRDAEPRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSFFNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIA-----TFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKL-----PEHVTMPDGDFSIRSWLEDPNGGN--LFITWR----EDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFIDELASLEKLAS------LADALTKGRKAGLRVVAGLQSTSQLDDVY------------------GVKEAQTLRASFRSLVVLGG---------------SRTDPKTNEDMSLSLGEHEVERDRALERVRERVVM---------PAEIANLPDLTAYVGFAGNRPIAKVPLEIKQFANRQPAFVEGT----------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83863 for 3232 contacts (-25.9/contact) +
2D Compatibility (PS) -41276 + (NN) -11088 + (LL) 7772
1D Compatibility (HY) -8800 + (ID) 3200
Total energy: -140455.0 ( -43.46 by residue)
QMean score : 0.305
|
|
|