Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATLFDPIVLGDLELPNRIVMAPLTRCRADEGRVPNALMAEYYAQRAD-AGLILSEATAVTPMGVGYPDTPGIWSDDQVRGWSNVTKAVHAAGGRIFLQLWHVGRISDPLYL-NGELPVAPS------AIAAEGHVSLVRPKRPYVTPRALDTEEIADIVEAYRQGAERAKAAGFDGVEIHGANGYLLDQFLQDSTNKRTDRYGGSIENRARLLLEVTDAAISVWGAQRVGVHLAPRADSHDMGDSNRLETFSHVARELGKRGIAF---ICAR-EAQADDSIGVALKKAFGGPYIANEQFTLDSANAILAKGDADAVAFGVPFIANPDLVERLRQGAELNPPRPETFYTGG-TEGYLDYPTLA
1VJI Chain:A ((12-368))---LLTPYKMGRFNLSHRVVLAPLTRQRS-YGNVPQPHAAIYYSQRTTPGGFLITEATGVSDTAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKAPISCSDKPLMPQIRSNGIDEAL-----FTPPRRLGIEEIPGIVNDFRLAARNAMEAGFDGVEIHGANGYLIDQFMKDTVNDRTDEYGGSLQNRCKFPLEIVDAVAKEIGPDRVGIRLSPFADYMESGDTNPGALGLYMAESLNKYGILYCHVIEARM------HTLMPMRKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLANPDLPKRFQVDAPLNKYDRPTFYTSDPVVGYTDYPFL-


General information:
TITO was launched using:
RESULT:

Template: 1VJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172976 for 2955 contacts (-58.5/contact) +
2D Compatibility (PS) -36365 + (NN) -22501 + (LL) 816
1D Compatibility (HY) -22800 + (ID) 7600
Total energy: -261426.0 ( -88.47 by residue)
QMean score : 0.620

(partial model without unconserved sides chains):
PDB file : Tito_1VJI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VJI-query.scw
PDB file : Tito_Scwrl_1VJI.pdb: