Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSMADRDGVIWYDGELVQWRDATTHVLTHTLHYGMGVFEGVRAYDTPQGTAI-FRLQAHTDRLFDSAHIMNMQIPYSRDEIN-EATRA--AVRENNL------ESAYIRPMVFYGSEGMGLRASGLKVHVIIAAWSWGAYMGEEALQQGIKVRTSSFTRHHVNIS---MTRAKSNGAYINSMLALQEAISGGADEAMMLDP--EGYVAEGSGENIFII----KDGVIYTPEVT-ACLNGITRNTILTLAAEHGFKLVEKRITRDEVYIA------DEAFFTGTAAEVTPIREV---DGR-KIGAGRRGPVTEKLQKAYFDLVSGKTEAHAEWRTLVK |
3DTG Chain:B ((54-350)) | ----------WHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSAR--RLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPA-GAY-----FKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALR---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76986 for 2005 contacts (-38.4/contact) +
2D Compatibility (PS) -28991 + (NN) -4030 + (LL) 3580
1D Compatibility (HY) -17200 + (ID) 4850
Total energy: -128477.0 ( -64.08 by residue)
QMean score : 0.354
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