Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
HAAFTVAHEIGHLLGLSHDDSKFCEENFGSTEDKRLMSSILTSIDASKPWSKCTSATITEFLDDGHGNCLLDLPRKQIPGPEELPGQTYDASQQCNLTFGPEYSVCPGMDVCARLWCAVVRQGQMVCLTKKLPAVEGTPCGKGRICLQGKCVDKTKKKYYSTSSHGNWGSWGSWGQCSRSCGGGVQFAYRHCNNPAPKNNGRYCTGK
2JIH Chain:A ((143-296))
-AAFTTAHELGHVFNMPHDDAKQCASLN----DSHMMASMLSNLDHSQPWSPCSAYMITSFLDNGHGECLMDKPQNPIQLPGDLPGTSYDANRQCQFTFGEDSKHCP---TCSTLWCTG----VLVCQTKHFPWADGTSCGEGKWCINGKCVNK-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40797 for 906 contacts (-45.0/contact) +
2D Compatibility (PS) -15218 + (NN) -11167 + (LL) 552
1D Compatibility (HY) -12000 + (ID) 3550
Total energy: -82180.0 ( -90.71 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_2JIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JIH-query.scw
PDB file :
Tito_Scwrl_2JIH.pdb
: