Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIMMLPMEQKIQWVPTSLQDITAVLGTEAYTEEDKSMVSHAQKSQHSCLSHSRWLRSPQVTGGSWDLRIRPSKDSSSFRQAQCLRKDPGANNHLESQGVRGTAGDADRELRGPSEKATAGQPRVTLLPTPHVSGLSQEFESHWPEIAERSPCVAGVIPVIYYSVLLGLGLPVSLLTAVALARLATRTRRPSYYYLLALTASDIIIQVVIV-FAGFLLQGAVLARQVPQAVVRTANILEFAANHASVWIAILLTVDRYTALCHPLHHRAASSPGRTRRAIAAVLSAALLTGI-PFYWWLDMWRDTDSPR---------TLDEVLKWAHCLTVYFIPC---------GVFLVTNSAIIHRLRR---------RGRSGLQPRV--GKSTAILLGITTLFTLLWAPRVFVMLYHMYV-----APVHRDWRVHLALDVANMVAMLHTAANFGLYCFVSKTFRATVRQVIHDAYLPCTLASQPEGMAAKPVMEPPGLPTGAEV |
| 3RFM Chain:A ((33-305)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNSNLQNVTNYFVVSLAAADILVGVLAIPFAITISTGFCAACHGCLFIACFVLVLA----QSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP-----GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAG---LFALCWLPLHIINCFTFFCPDCSHAPL---WLMYLAIVLAHT----NSVVNPFIYAYRIREFRQTFRKIIRS------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179734 for 1629 contacts (-110.3/contact) +
2D Compatibility (PS) -23311 + (NN) -4999 + (LL) 13880
1D Compatibility (HY) -21200 + (ID) 3100
Total energy: -218464.0 ( -134.11 by residue)
QMean score : 0.217
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