Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVNSTHRGMHTSLHLWNRSSYRLHSNASESLGKGYSDGGCYEQLFVSPEVFVTLGVISLLENILVIVAIAKNKNLHSPMYFFICSLAVADMLVSVSNGSETIVITLLNSTDTDAQSFTVNIDNVIDSVICSSLLASICSLLSIAVDRYFTIFYALQYHNIMTVKRVGIIISCIWAACTVSGILFIIYSDS-------SAVIICLIT--------MFFTMLA-------LMASLYVHMFLMARLHIKRIAVLPGTGAIRQGANMK---GAITLTILIGVFVVCWAPFFLHLI--FYISCPQNPYCVCFMSHFNLYLILIMCNSIIDPLIYALRSQELRKTFKEIICCYPLGGLCDLSSRY |
3PWH Chain:A ((12-303)) | -------------------------------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAITISTGFCAACHGCLFIACFVLVLAQ-------SSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQPGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLP--LHIINCFTFFCPDCSHAPLWLMY--LAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225208 for 1894 contacts (-118.9/contact) +
2D Compatibility (PS) -25655 + (NN) -2403 + (LL) 3188
1D Compatibility (HY) -24400 + (ID) 4200
Total energy: -278678.0 ( -147.14 by residue)
QMean score : 0.182
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