Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLELDEYYNKTLATENNTAATRNSDFPVWDDYKSSVDDLQYFLIGLYTFVSLLGF---MGNLLILMALMKKRNQKTTVNFLIGNLAFSDILVVLFCSPFTLTSVLLDQWMFGKVMCHIMPFLQCVSVLVSTLILISIAIVRYHMIKHPISNN--LTANHGYFLIATVWTL-GFAICSPLPVFHSLVELQETFGSALLSSRYLCVESWPSDSYRIAFTISLLLVQYILPLVCLTVSHTSVCRSISCGLSNKENRLEENEMINLTLHPSKKS------GPQVKLSGSHKWSYSFIKKHRRRYSKKTACVLPAPERPSQE---------NHSRILP--ENFGSVRS--------QLSSSSKFIPGVPTCFEIKPEENSDVHEL-------------RVKRSVTRIKK----------RSRSVFYRLTILILVFAVSWMPLHLFHVVTDFNDNLISNRHFKLVYCICHLLGMMSCCLNPILYGFLNNGIKADLVSLIHCLHM |
| 3PDS Chain:A ((6-430)) | ----------------------------------------EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAACILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINC---YAEETCCDFFTNQAYAIASSI----VSFYVPLVIMVFVYSRVFQEAKRQL-NIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG--VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIR----KEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230359 for 2484 contacts (-92.7/contact) +
2D Compatibility (PS) -36944 + (NN) -2165 + (LL) 3380
1D Compatibility (HY) -31600 + (ID) 4550
Total energy: -302238.0 ( -121.67 by residue)
QMean score : 0.161
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