Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRENNQSSTLEFILLGVTGQQEQEDFFYILFLFIYPITLIGNLLIVLAICSDVRLHNPMYFLLANLSLVDIFFSSVTIPKMLANHLLGSKSISFG------GCLTQMYFMIALGNTDSYILAAMAYDRAVAISRPLHYTTIMSPRSCIWLIAGSWVIGNANALPHTL----------LTASLSFCGNQEVANFYCDITPLLKLSCSDIHFHVKMMYLGVGIFSVPLLCIIVSYIRVF-----------------STVFQVPSTKGVLKAFSTCGSHLTVVSLYYGTVMGTYFRPLTNYSLKDAVITVMYTAV-----TPMLNPFIYSLRNRDMKAALRKLFNKRISS
2YDV Chain:A ((14-307))-------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--------ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACLFEDVVPMNYM----VYFNFFACVL------VPLLLMLGVYLRIFLAARRQLKQMESQSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCF------TFFCP----DCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR


General information:
TITO was launched using:
RESULT:

Template: 2YDV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -199144 for 1887 contacts (-105.5/contact) +
2D Compatibility (PS) -25368 + (NN) -3639 + (LL) 3268
1D Compatibility (HY) -29600 + (ID) 3750
Total energy: -258233.0 ( -136.85 by residue)
QMean score : 0.254

(partial model without unconserved sides chains):
PDB file : Tito_2YDV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YDV-query.scw
PDB file : Tito_Scwrl_2YDV.pdb: