Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEETNNSSEKGFLLLGFSDQPQL---ERFLFAIIL-YFYVLSLLG---NTALILVCCLDSRLHTPMYFFLSNLSCVDICFTTSVAPQLLVTMNKKDKTMSYGGCVAQLYVAMGLGSSECILLAVMAYDRYAAVCRPLRYI------AIMHPRF-------CASLAGGAWLSGLITSLIQCSLTVQLPLCGHRTLDHIFCEVPVLIKLACVDTTFNEAELFVASVVFLIVPVLLILVSYGFITQAVLRIKSAAGRQKAFGTCS------SHLVVVIIFYGTIIFM-YLQPANRRSKNQG-KFVSLFYTI------VTPLLNPIIYTLRNKDVKGALRTLILGSAAGQSHKD |
| 3PXO Chain:A ((25-319)) | ------------------EAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGW-SRYIPEGMQCS-------CG---IDYYTPH----------EETNNESFVIYMFVVHFIIPLIVIFFCYG---QLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205340 for 1891 contacts (-108.6/contact) +
2D Compatibility (PS) -26322 + (NN) -6169 + (LL) 4108
1D Compatibility (HY) -27600 + (ID) 4000
Total energy: -265323.0 ( -140.31 by residue)
QMean score : 0.216
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