Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTSLTDLCFSPIQVAEIKSLPKSMNETNHSRVTEFVLLGLSSSRELQPFLFLTFSLLYLAILLGNFLIILTVTSDSRLHTPMYFLLANLSFIDVCVASFATPKMIADFLVERKTISFDACLAQIF---FVHLFTGSEMVLLVSMAYDRYVAICKPLHYMTVMSRRVCVVLVLISWFVGF-IHTTSQLAFTVNLPFCGPNKVDSFFCDLPLVTKLACIDTYVVSLLIVADSGFLS--LSSFLLLVVSYTVILVTVRNR------SSASMAKARSTLTAHI------TVVTLFFGPC--------IFIYVWPFSSYSVDKV--LAVFYTIFTLILNPVIYTLRNKEVKAAMSK-LKSRYLKPSQVSVVIRNVLFLETK |
| 3PWH Chain:A ((21-305)) | --------------------------------------------------------------ILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIP-----FAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNN----CGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PWH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218396 for 1736 contacts (-125.8/contact) +
2D Compatibility (PS) -24775 + (NN) -7153 + (LL) 8276
1D Compatibility (HY) -24800 + (ID) 3450
Total energy: -270298.0 ( -155.70 by residue)
QMean score : 0.187
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