Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEFTDRNYTLVTEFILLGFPTRPELQIVLFLMFLTLYAI-ILIGNIGLMLLIRIDPHLQTPMYFFLSNLSFVDLCYFSDIVPKMLVNFLSENKSISYYGCALQFY----FFCTFADTESFILAAMAYDRYVAICNPLLYTVVMSRGICMRLIVLSYLGGNMSSLVHTSFAFILKYCDKNVINHFFCDLPPLLKLSCTDTTINEWLLSTYGSSVEIICFIIIIISYFFILLSVLKIRSFSGRKKTFSTCASHLTSVTIYQGTLLFIYSRPSYLYSPNTDKIISVFYTIFIPVLNPLIYSL-----RNKD---VKDAAEKVLRSKVDSS |
| 2RH1 Chain:A ((36-310)) | ----------------------DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWC--EFWTSIDVLCVTASIET--LCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHW-YRATHQEAINCY-------AEETCCDFFTNQ----AYAIASSIVSFYVPLVIMVFVY-----SRVFQEAKRQLNI----FEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKS-----PSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159272 for 1720 contacts (-92.6/contact) +
2D Compatibility (PS) -26822 + (NN) -7210 + (LL) 4772
1D Compatibility (HY) -20800 + (ID) 3200
Total energy: -212532.0 ( -123.57 by residue)
QMean score : 0.242
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