Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGIMAWNATCKNWLAAEAALE---KYYLSIFYGIEFVVGVLGNTIVVYGYIFSLKNWNSSNIYLFNLSVSDLAFLCTLPMLIRSYANGNWIYGDVLCISNRYVLHANLYTSILFLTFISIDRYLIIKYPFREHLLQKKEFAILISLAIWVLVTLELLPILPLINPVITDNGTTCNDFASSGDPNYNLIYSMCLTLLGFLIPLFVMCFFYYKIALFL---------KQRNRQVATALPLEKPLNLVIMAVVIFSVLFTPYH----VMRNVRIASRLGSWKQYQCTQVVINSFYIVTRPLAFLNSVINPVFYFLLGDHFRDMLMNQLRHNFKSLTSFSRWAHELLLSFREK |
4RWD Chain:A ((104-399)) | -------NAYIQKYLGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRS------LRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRR---------DPLVVAALHLCI-ALGYANSSLNPVLYAFLDENFKRCFRQLC------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222080 for 2076 contacts (-107.0/contact) +
2D Compatibility (PS) -28620 + (NN) -5551 + (LL) 4168
1D Compatibility (HY) -25600 + (ID) 4100
Total energy: -281783.0 ( -135.73 by residue)
QMean score : 0.169
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