Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILLLFTQAILVSLDFFGSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIISP-SIFSLAKLKHPSASHILGFFLFSWVLNMFIGVIFCCTLRLPPVKRGQSSVCHTALFLFAHELH-PQ---ET-VFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIR-GYLSAF--TQ-------------------------------------------------------------------------------------------------------------------------------------------------------PACPRVSPVKRASQAIL-LLVSFVFTYWVDFTFSFSGGVTWI---NDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK |
| 3V2Y Chain:A ((58-495)) | ------------------------------------DKENSIKLTSVVFILICCFIILENIFVLLTIWKT---KKFHRPMYYFIGNLALSDLLAGVAY-TANLLLSGATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITMLK-----------NNFRLFLLISACWVISLILGGLPIMGWNCIS----------------ALSSCSTVLPLYHKHYIL-FCTTVFTL----LLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193306 for 1898 contacts (-101.8/contact) +
2D Compatibility (PS) -27074 + (NN) -3677 + (LL) 7360
1D Compatibility (HY) -10400 + (ID) 1550
Total energy: -228647.0 ( -120.47 by residue)
QMean score : 0.233
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