Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTIRTTQMQVDHKTSLIIDAVEKFGGEVRLVGGCVRDSILQRKVHDIDLATNLLPSQVIEALKFHNIKAIPTGLKHGTITAVLNQRSFEITTLR-HDVKCDGRHAKVEFTDNW----RADASRRDFTFNALYANKYGH-IYDYFGGTQDLKARRLNFIGNAEDRIKEDYLRILRAFRFHAKICIGDMSDKILNVCKKHAHKIYNLSGERIRDEMFKLLEYDAPVPTLKSMQKSDVLQKIIPKEVKCEILSSAFLFGTDALVKLALLLRTTEKNDRLSLGEYVSKFLRLSNKQKKKLLFLLSNNIKTELTEKEQRKYISLLGKELYCDLVKVCGVESGANVDEYISLAQVLNIQKFPLSGDDLINIGYQPGKNLGRNLKLLRQHWEDSSYTLTKKELMLYAKSLL |
| 3AQN Chain:A ((28-250)) | ---------------------LNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKL--FRNCRLV--GRRFRLAHVMFGPEIIEVATFRG----------------NIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAKLGM-RISPETAEPIPRLATLLNDIPPAHLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGML-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AQN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109213 for 1430 contacts (-76.4/contact) +
2D Compatibility (PS) -20287 + (NN) -1912 + (LL) 2924
1D Compatibility (HY) -13200 + (ID) 3400
Total energy: -145088.0 ( -101.46 by residue)
QMean score : 0.509
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