Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSIGLSEILVVVLVSIIVLDKNKVPVFIDLIKNIYRYLTIIKSKARRLL----KDAGIEELYKE-YNTEKVNYIIGKDGKLYPTYNIDNTPKDNDSEDSSSRRRAI
1NUH Chain:A ((42-117))
-----------------LTLNTNHGHILVDYSKNL------VTEDVMRMLVDLAKSRGVEAARERMFNGEKINYTEGRAVLHVALRNRSNTPILVDGKDVMPEVNKV
General information:
TITO was launched using:
RESULT:
Template:
1NUH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 11875 for 295 contacts (40.3/contact) +
2D Compatibility (PS) -7841 + (NN) -4166 + (LL) 2812
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -420.0 ( -1.42 by residue)
QMean score : 0.190
(partial model without unconserved sides chains):
PDB file :
Tito_1NUH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NUH-query.scw
PDB file :
Tito_Scwrl_1NUH.pdb
: