Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKDEKSKTLFEVEGAVTALLPAA--EFRVKLDNEHEIICHVSGKVRRSKIRIIIGDRVLVEMSIYDRNAKKGRIIRRLKGTSDRTISK
2AQE Chain:A ((24-89))
---NEKEKELCQV----VRLVPGAYLEYKSALLNE----CHKQGGLRLAQARALIKIDVNKTRKIYDFLIREGYITKA-----------
General information:
TITO was launched using:
RESULT:
Template:
2AQE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14016 for 436 contacts (-32.1/contact) +
2D Compatibility (PS) -6586 + (NN) -1067 + (LL) 1732
1D Compatibility (HY) -2800 + (ID) 1200
Total energy: -23937.0 ( -54.90 by residue)
QMean score : 0.194
(partial model without unconserved sides chains):
PDB file :
Tito_2AQE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AQE-query.scw
PDB file :
Tito_Scwrl_2AQE.pdb
: