Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEQFLNNLILASSSERRIALLKQINIEPGLILPADIDEIPLRKELPKDYSIRMAKSKAEKIQSSNPDYFVLGIDTVVACGRRILLKAKNIEQAEKYIRLLSGRRHRVYTSVCLLTPDRSKQHIRTVVTI--VKFKRLSEREIKYYLASEEWKNRAGGCNMQGLAGMFVLFLRG-SYSSIIGLPLHETYCLLSNYFNLNLY
4JHC Chain:A ((23-198))
------PKLILASTSPWRRALLEKLQISFECAAP-EVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALF--NSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLRREGKNPLM
General information:
TITO was launched using:
RESULT:
Template:
4JHC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89172 for 1337 contacts (-66.7/contact) +
2D Compatibility (PS) -19267 + (NN) -8603 + (LL) 1000
1D Compatibility (HY) -7600 + (ID) 2900
Total energy: -126542.0 ( -94.65 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_4JHC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JHC-query.scw
PDB file :
Tito_Scwrl_4JHC.pdb
: