Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIENIQQEFFPLFDKIKKEGDPIYNARVGFNIVKSLIERGTGWNKDEIYEVLQKELNKMERAQQELEKEAERVLSRYIIDDDVKGAVKGVSIYGNHASIKLEDNKKEFKISEFLNSDFCQKNGISGFSTLHRDEKSGMHGFVAEEGEGKDKRKVRHYVVTDGSYEMTLNWYDKEGKKCTIRININANSIKLIGGNITEEQLKDLSKANWDVKIGGLFLHEIEFRKTRENEINMSFETAIKIFGRSIQTTDMNREIGSQNAMTSTTNSHAPTKENPPLPPHRVSSLKKGVEQRKTKSLDHQSNGQKVEFNKYIQSNTLDLHELNSMNVPKLLELLKKEQNTTQINLGWNSIDNKNAEKLFRQRGLVIMANCREEENPGDQGYNLQSLFEVPTPSPLRTSSLKKNVSDEQGENISFKPISQSQDNRQKDERYDNLTFVMFRYTTSGRKKTVTEEDLQVKSAVFALPTQDVTLKKVEGTFKSEDAKKSDNMRDKQTSQDGVASILARRAEIEFLYSESERGDGLSDPEDDRSGNKDEYLTLLNPQSDDKNAKRGEKYENCDCNDNLEHIYENTDWLCDDKQDNRQRDKRYDNHTFAMFVYTLPGSKRPDDLHRNEQKLDNQQQPEIQQQGQSHSRPQSDSKGNLDVKGIQPSALSEDGDRPISTSTDKRNTKQLEYGKNSKDHNSETCMVPSKPAGKESKSIQFTNPSNQMVGKLEKVLKKLDRE----SEKTVQQVAEGSVSINKPLSSVSTDGNMDAEQNSHTQSEETNLSTPEKTNVNSSTSFKELEQRLSQKNYELKKISSKVRYISPQTKEYLMEAELLKDSSTDIRKAIERKNAHTSPTTDKNSELYKLLEKDKTQLKVRVIEKVVEGASAKHTDNYDRNRITLGNKNRKLLWTKHVKQQQEKGKGISI |
3CKF Chain:A ((107-248)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STLVSKKVTRADGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEKTTLVVKEGTVTLSK---NISKSGEVSVELN----DTDSSAATKKTAAWNSGTSTLTITVN-SKKTKDLVFTSSN----TITVQQYDSNGTSLEGSAVEITKLDEIKNALK------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 95534 for 915 contacts (104.4/contact) +
2D Compatibility (PS) -13803 + (NN) 6024 + (LL) 40688
1D Compatibility (HY) -2000 + (ID) 2000
Total energy: 124443.0 ( 136.00 by residue)
QMean score : 0.082
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