Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYIDIIKSRLLLSDIVGKKVRLTKRGDSFVGFCPFHSEKTPSFLVSNTKGSYHCFGCSAHGDVFNFISQTEGLSFKEALERLASVVGVELPKTLNLAKENGELFSTLNLAASWFVQKNQGIIAYLKQRKISPKIIDKFKVGYAPSSG--LKEYLNSLGIEDKILIDVGLINKNSR-----DYFCNRLIFPIYNIAGKVIGFGGRALSSKQQPKYLNSPESQLFKKRENLYGLNFALSEIHKKQHVFVVEGYMDVIALHQTGISNIVAPLGTAISAEQIKSLWKFAKEISICMDGDSAGRNAAIRVAELVLPILEPGYTLKFVTLPTDKDPYDVCNELEHKKETVLSALDHSTKLHSEYLWHYIIGSNLQNYEKLAPEKYSILERKFMEYVNAIGNSSIRRYYRDYFYDKASELRNSFKKQVFNNKTRATKSEYLYNKSPELIEAEQNQAIILRITLEFPEILNHPIYFEQFSHFEFTNVKIKRLQQHIINVANNGSELNKEVLLQELEQFNVDGTIKLIFEKTSILNSQLNNGKSAKTVWNNIVLRGELNVLQRERIEARLGGDFGLEERLIEQIEQIESNIREMQMEFIQK |
| 4EDK Chain:A ((33-237)) | --------------------------------------------------------------------------------------------------------------------------LTYLQERGFTDALIKERGIGFAPDSSHFCHDFLQKKGYDIELAYEAGLLSRNEENFSYYDRFRNRIMFPLKNAQGRIVGYSGRTYTG-QEPKYLNSPETPIFQKRKLLYNLDKARKSIRKLDEIVLLEGFMDVIKSDTAGLKNVVATMGTQLSDEHITFIRKLTSNITLMFDGDFAGSEATLKTGQ---HLLQQGLNVFVIQLPSGMDPDEYIGKYGNDAFTTFVKNDKKSFAHYKVSILKDEIAHNDLSYERYLKELSHDISLMKSSILQQKAINDVAPFFNVSPEQLANEI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EDK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118070 for 1459 contacts (-80.9/contact) +
2D Compatibility (PS) -21702 + (NN) -10674 + (LL) 22132
1D Compatibility (HY) -19200 + (ID) 3550
Total energy: -151064.0 ( -103.54 by residue)
QMean score : 0.548
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