Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIIKFVLLLPTILLILTAGVYLSVRLKWLQIFRLPHALSLIGVKKGENKFSSIAALFTILGGNLGVGNISGTAVALKTGGPGSILWMAIIVIITSVIKYVTCYLSIKNRKKKNGRFIGGPMAYMVDAFNSRKATVVFLVIMIMVSIIVGNLVQVNSLSIPLDMINVPVVTGGIIMTIIFFVVAALSLKKIKIFISAMIPIMTISYLTLCGIILFKFSENILPSLKLITSSFFTTSSFNFGLSLGLVLEMLTIIQVGTLRGIFATDIGLGLEGIVHSSIIPKKNNNKFIIEQSLITIISPFIVAFIVFITTMVLLVTDSWVTGLESTNMCIFAFRKAMNWPYIDYLIMAIMFCFAFTTIFTWFFCSKQTIRYVSQNDKYTKIWIIIFTAVIPLGSISKVQLLWDVADISIAALLFINILAILKLTSRDPEVFTVSSRYLKLNQPIFNKNKTRNWLAILILRG |
2WSW Chain:A ((87-111)) | ----------------------------------------------EKPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISSPPFGMEGYSAPAKEIGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHVNGLFGTVVDNFYLVALILAMGTSLGLATPLVTECIQYLFGIPHTLQLDAIIISCWILLNAICVAFGLQKGVKIASDVRTYLSFLMLGWVFIVGGASFIVNYFTDSVGTLLMYMPRMLFYTDPIGKGGFPQAWTVFYWAWWVIYAIQMSIFLARISKGRTVRELCLGMVSGLTAGTWLIWTILGGNTLQLIDQNILNIPQLIDQYGVPRAIIETWAALPLSTATMWGFFILCFIATVTLINACSYTLAMSTCRSMKEGADPPLLVRIGWSVLVGIIGIILLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2WSW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2117 for 95 contacts (-22.3/contact) +
2D Compatibility (PS) -2706 + (NN) -1978 + (LL) 5080
1D Compatibility (HY) -1200 + (ID) 150
Total energy: -3071.0 ( -32.33 by residue)
QMean score : -0.002
|
|
|