Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNGSIALSSILSAITDTILGTLKNTAVNTPNVKSTGYNILPNTASKVVPVVITVIIDPPIL
1JY4 Chain:A ((11-23))
------------------------RTALNT-AVQKWHFVLGYKCEILA--------------
General information:
TITO was launched using:
RESULT:
Template:
1JY4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2102 for 38 contacts (55.3/contact) +
2D Compatibility (PS) -1369 + (NN) -730 + (LL) 2244
1D Compatibility (HY) -800 + (ID) 250
Total energy: 1197.0 ( 31.50 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1JY4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JY4-query.scw
PDB file :
Tito_Scwrl_1JY4.pdb
: