Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLNNLNCCTKFGIELEFYTEGIEREHLFLNSVKNKIALLGFSCKKESSTHQYEIKSGCYND----SNNLIKHFD---LAKELLTETAQKLGGNTSFKAKPYLDRAGSALNVHVNLVDSNNSNLFYCNE-QKYSDYLIYGIGGLCAMMKEHMSFFAPSDDSYLRFQYPDIHTPTTISWGVNNRTAAIRIPCLGSKC---RLEHRVPGADCNLEKVLIAIIEGITFGIENKIAPPNRVYGIASDPQYKMENLV |
| 3NG0 Chain:A ((202-392)) | -------------------------------------MAAFGVPIEK----HHHEVASGGQNELGIKFDKLVNSADNLMIYKYVIKNVAKKYGKTVTFMPKPIFNDNGSGMHVHQSLW-KDGQPLFAGDKYAGFSQMGLWYIGGILKHAPALLAFTNPTTNSYKRL-VPGFEAPVNLAYSQGNRSASVRIPLSGGNPKAKRLEFRCPDATSNPYLAFAAMLCAGIDGIKNQIDPGEPLDVDIELAKIPSTPGS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87505 for 1287 contacts (-68.0/contact) +
2D Compatibility (PS) -18753 + (NN) -5580 + (LL) 2876
1D Compatibility (HY) -9200 + (ID) 2750
Total energy: -120912.0 ( -93.95 by residue)
QMean score : 0.407
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