Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSLKELSLRIKNIRSVQKTTKIMQMVSAAKLLQSQKKLSNSKLYISKLHDIISSIMSSADQELLAKIFTTGDNDSYLVFIIASDRGLCGSFNSSIAKSSQEYVNKLIASSKKVDIVFLGKKAFDIGKNRFDSKSILKIENSKGITLKRV--------EALVDSMDL----SKYDRIKVFYNKFYNTFT----QKPM--LETIKPWSKSSSLIDDYLTNSTIDYNYKYEPQNTEFILRSLIQNYVVTALYSALLESAASENSARMAAMESANRNTKEMLNKLALLYNCSRQAAITTDLIEVIGGAESL |
| 2W6H Chain:G ((1-272)) | -ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVY---------GVGSLALYEK-ADIKTPE-----LIIGVSSDRGLCGAIHSSVAKQMKSEAANL----KEVKIIGVGDKIRSI-LHRTHSDQFL-------VTFKEVGRRPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTISS-AESMSIYDD------IDAD----------VLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2W6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -55187 for 1745 contacts (-31.6/contact) +
2D Compatibility (PS) -26876 + (NN) -12461 + (LL) 2216
1D Compatibility (HY) -18400 + (ID) 4950
Total energy: -115658.0 ( -66.28 by residue)
QMean score : 0.404
|
|
|