Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEQKIQAFEWFRALRDRVVESFLLIEGQSPTDPKIEKRKWDRPGGGGGESTIIY-GDVFEKVGVNISKVYGKFADSVVNEIPG------ASESNGEFWASGISLVSHMQSPLVPAAHMNTRLIYTSKQ------WFGGGMDFTPTYKNEEDYKYIHESIKTTCDKFDAEYYLKFKEQCDNYFFLQHRKEPRGIGGIFYDNLNSGRWENDFEFTKAVGETFLKIYLHIIRQHMRKPWTKEQRETQLIKRGRYVEFNLLYDRGTKFGLMTDGNP-DAIMMSMPPLVKWM |
| 2AEX Chain:A ((72-319)) | ---------------------------------------RWERKEGGGGISCVLQDGCVFEKAGVSISVVHGNLSEEAAKQMRSRGKVLKTKDGKLPFCAMGVSSVIHPKNPHAPTIHFNYRYFEVEEADGNKQWWFGGGCDLTPTYLNQEDAVHFHRTLKEACDQHGPDLYPKFKKWCDDYFFIAHRGERRGIGGIFFDDLDSPSKEEVFRFVQSCARAVVPSYIPLVKKHCDDSFTPQEKLWQQLRRGRYVEFNLLYDRGTKFGLFTPGSRIESILMSLPLTARWE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81931 for 1801 contacts (-45.5/contact) +
2D Compatibility (PS) -24416 + (NN) -5173 + (LL) 3500
1D Compatibility (HY) -18000 + (ID) 5050
Total energy: -131070.0 ( -72.78 by residue)
QMean score : 0.449
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