Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRKIILQLLISIVIIFTLASAFVFVVVCINKGKPERKDKLYEIDAAHSSWVQTIAYYLVKPILESALDRYIEKHGLIEYLKEIIQQKVEKGSINFYEIIEGSGSRAFCGQEVVLQMYKISDNLATPLPLPKQTSDVTLVIGQDNQREVGLGVIGMKEGGERVVTINNIANKNEVNFNSYYIKLIEVKDKYPDSVNSMMIFNELINKTGKQVKCGDRVSVKYSLMGHDGEYII----KNQTVQFKVGNKKVPLAMELGVIGMKEGNNRTIISPPELLNVTDDMLIENIDFDEESVSIISLSLDDKQEIAAHHSTVE |
3UQB Chain:A ((101-183)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFGSSKDRN-PFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32154 for 467 contacts (-68.9/contact) +
2D Compatibility (PS) -8607 + (NN) -3826 + (LL) 16584
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: -30803.0 ( -65.96 by residue)
QMean score : 0.404
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