Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKHQETTSQQYNFSIIKHGDISTPQGFTAGGMHIGLRANKKDFGWIYSSSLASSAAVYTLNQFKAAPLIVTEDTLQKSKGKLQALVVNSANANSCTGQQGIDDARQTQTWVAQQLQIPSEHVAVASTGVIGEYLPMDKIKTGTEHIKDTNFATPGAFNEAILTTDTCTKHIAVSLKIDGKTVTIGGSAKGSGMIHPNMATMLAFITTDASIESNTLHQLLKSSTDHTFNMITVDGDTSTNDMVLVMANHQVEHQILSQDHPQWETFVDAFNFVCTFLAKAIARDGEGATKLISVNVSGAKSISDARKIGKTIVSSNLVKSAIFGEDANFGRIITAIGYSG--CEIDPKCTYVQLNQIPVV--DKGMAVLFDEQAMSNTLTHEHVTIDVQLGLGNAAATAYGCDLSYDYVRINASYRT |
2V4I Chain:B ((182-383)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLTFFATDARLDPAEQDRLFRRVMDRTFNAVSIDTDTSTSDTAVLFANG------LAGEVDAGE-FEEALHTAALALVKDIASDGEGAAKLIEVQVTGARDDAQAKRVGKTVVNSPLVKTAVHGCDPNWGRVAMAIGKCSDDTDIDQERVTIRFGEVEVYPP---DDAL--RAAVAEHLRGDEVVIGIDLAIADGAFTVYGCDLTEGYVRLNSE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128882 for 1493 contacts (-86.3/contact) +
2D Compatibility (PS) -21311 + (NN) -6626 + (LL) 12704
1D Compatibility (HY) -12400 + (ID) 3800
Total energy: -160315.0 ( -107.38 by residue)
QMean score : 0.344
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