Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKLTFKENMFIGSMLFGLFFGAGNLIFPIHLGQAAGSNVFIANLGFLITAIGLPFLGIIAIGISKTSGLFEIASR-VNKTYAYIFTIALYLVIGPFFALPRLATTSFEIAFSPFLSPKQITLYLFIFSFVFF-VIAWFFARKPSRILEYIGKFLNPVFLVLLAIILLFAFIHPLGGISDAP-ISKQYQ-SH----ALFN-GFLD--GYNTLD-ALASL----AFGIIIVATIKKLG--IENPTDIAKETIKSGTISIIMMG-IIYTLLA--IMGTLSI--GH--------FKLSENGGIALAQITQYYLGNYGIVLLSLIVMVACLKTAIGLITAFSETFEHLF-PK-----MNYL-------AIATVVSFISFLFANVG--LTKIIMYSVPVLMFLYPLAIALIVLTLFSSKFHHSKIIYQCTIFFTMIAALVDGLKASPEFISSTSFSQTLINFSQKYLPLSDIGMGWVVLSLIGFIIGFIIYKIKHRKIP |
| 3DH4 Chain:A ((60-421)) | -----------AVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMSAITLIIVGKYFLPIFIEKGIYTIPEFVEKRFNKKLKTILAVFWISL-YIFVNLTSVLYLGGLAL-ETILG-----IPLMYSILGLALFALVYSI------VVWTDVIQVFFLVLGGFMTTYMAVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITSDPQLMASLGDIAATNLPSAANADKAYPWLT-QFLPVGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEYISPDSGDHKLVNVGRTAAVVALIIACLIAPMLGGIGQAFQYIQEYTGLVSPGILAVFLLGLFWKK-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206282 for 2109 contacts (-97.8/contact) +
2D Compatibility (PS) -31299 + (NN) 3771 + (LL) 9396
1D Compatibility (HY) -1200 + (ID) 1150
Total energy: -226764.0 ( -107.52 by residue)
QMean score : 0.024
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