Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQAILNFIVDILSQPAILVALIAFIGLIVQKKPAATITSGTIKTILGFLILSAGADVVVRSLEPFGKIFQHAFGVQGIVPNNEAIVSLALKDFGTTAALIMVCGMIVNILIARFTNLKYIFLTGHHTFYMAAFLAIILTVSHIKGWLTIVIGALVLGLIMAVLPALLQPTMRKITGNDQVALGHFG-SISYFAAGAVGQLFKGKSKSTEEIKFPKGLSFLRESTISISITMALLYFIAC----------LFAGVSYVHESISDGQNFIVFSLIQGVTFAAGVFIILTGVRLILAEIVPAFKGISEKLVPNSKPALDCPIVFPYAQNAVLIGFFVSFITGVIGMFILFLFGGVVILPGVVAHFFLGATAAVFGNARGGIKGAVAGAALNGILITFLPLLFLPFLGELGGAATTFSDTDFLTVGIVFGNAVKYMGLFGAILFIIIVGATAILLKGRQKPQQ |
| 4B99 Chain:A ((155-276)) | -----------------------------------------------------------------------------------------------------------------------------------------LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL-------QYFMTEYVATRWYRAPELMLSLHEYTQAID-----LWSVGCIFGEMLARRQLFPGKNYVHQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42236 for 593 contacts (-71.2/contact) +
2D Compatibility (PS) -9938 + (NN) 80 + (LL) 29400
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -31294.0 ( -52.77 by residue)
QMean score : 0.148
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